PH01000703G0370's details annotation
1.Annotation
ICBR annotation: receptor-like protein kinase precursor, putative
Blast result AT3G47570 : 0
Blast annotation: Leucine-rich repeat protein kinase family protein
2.Location
Scaffold: PH01000703
Strand: -
| Region | Start | End |
| gene | 262947 | 266553 |
| mRNA | 262947 | 266553 |
| exon | 262947 | 263435 |
| exon | 263562 | 266553 |
| CDS | 263035 | 263435 |
| CDS | 263562 | 266418 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000293 | RLK-Pelle_CrRLK1L-1 (from iTAK) RLK-Pelle_LRR-XII-1 (from iTAK) GT1 GlycosylTransferases |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08263.11 | LRRNT_2 | 2 | 20 |
| PF13855.5 | LRR_8 | 97 | 157 |
| PF13855.5 | LRR_8 | 485 | 544 |
| PF13855.5 | LRR_8 | 607 | 665 |
| PF00069.24 | Pkinase | 771 | 988 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.