PH01000708G0190's details annotation
1.Annotation
ICBR annotation: oligopeptide transporter, putative, expressed
Blast result AT4G10770 : 1.40E-67
Blast annotation: oligopeptide transporter 7
2.Location
Scaffold: PH01000708
Strand: +
| Region | Start | End |
| gene | 139597 | 141504 |
| mRNA | 139597 | 141504 |
| exon | 139597 | 139809 |
| exon | 139937 | 140424 |
| exon | 140500 | 140597 |
| exon | 140662 | 141504 |
| CDS | 139701 | 139809 |
| CDS | 139937 | 140424 |
| CDS | 140500 | 140597 |
| CDS | 140662 | 140824 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03169.14 | OPT | 79 | 233 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0055085 | transmembrane transport |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.