PH01000708G0760's details annotation 1.Annotation ICBR annotation: spastin, putative, expressed
Blast result AT2G45500 : 8.00E-151 Blast annotation: AAA-type ATPase family protein 2.Location Scaffold: PH01000708 Strand: + Region | Start | End | gene | 463954 | 472768 | mRNA | 463954 | 472768 | exon | 463954 | 466899 | exon | 466988 | 467079 | exon | 467513 | 467538 | exon | 468515 | 468755 | exon | 468841 | 468936 | exon | 469021 | 469136 | exon | 469225 | 469305 | exon | 470909 | 470986 | exon | 471548 | 471638 | exon | 472276 | 472311 | exon | 472392 | 472492 | exon | 472650 | 472768 | CDS | 466640 | 466899 | CDS | 466988 | 467079 | CDS | 467513 | 467538 | CDS | 468515 | 468755 | CDS | 468841 | 468936 | CDS | 469021 | 469136 | CDS | 469225 | 469305 | CDS | 470909 | 470986 | CDS | 471548 | 471638 | CDS | 472276 | 472311 | CDS | 472392 | 472492 | CDS | 472650 | 472766 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM001870 | Basal_transcription_factors SNF2 Transcription_Regulator(from iTAK) transferase activity, transferring pentosyl groups,
|
5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00004.28 | AAA | 240 | 304 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0000166 | nucleotide binding | GO:0005524 | ATP binding | GO:0017111 | nucleoside-triphosphatase activity |
|