PH01000714G0250's details annotation
1.Annotation
ICBR annotation: glycosyltransferase family protein 1, putative, expressed
Blast result AT5G04480 : 1.90E-27
Blast annotation: UDP-Glycosyltransferase superfamily protein
2.Location
Scaffold: PH01000714
Strand: -
| Region | Start | End |
| gene | 165007 | 169465 |
| mRNA | 165007 | 169465 |
| exon | 165007 | 165447 |
| exon | 166281 | 166490 |
| exon | 166723 | 166878 |
| exon | 167168 | 169465 |
| CDS | 165340 | 165447 |
| CDS | 166281 | 166490 |
| CDS | 166723 | 166878 |
| CDS | 167168 | 167326 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000340 | PEK_PEK (from iTAK) Steroid_biosynthesis Homologous_recombination DNA metabolic process, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor, |
| coexpression network | CFinderM001480 | Steroid_biosynthesis oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor, membrane, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.