Annotation of co-expression genes

PH01000714G0260's details annotation

1.Annotation

ICBR annotation: glycosyltransferase family protein 1, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000714
Strand: +

RegionStartEnd
gene170475171556
mRNA170475171556
exon170475171556
CDS170789171469

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networkCFinderM001480Steroid_biosynthesis
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor,
membrane,

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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