PH01000718G0330's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G75100 : 2.80E-37
Blast annotation: J-domain protein required for chloroplast accumulation response 1
2.Location
Scaffold: PH01000718
Strand: -
| Region | Start | End |
| gene | 210024 | 218651 |
| mRNA | 210024 | 218651 |
| exon | 210024 | 210311 |
| exon | 210670 | 210846 |
| exon | 211192 | 211269 |
| exon | 211367 | 211426 |
| exon | 211623 | 211706 |
| exon | 213454 | 213539 |
| exon | 213913 | 214027 |
| exon | 214205 | 214527 |
| exon | 214924 | 215573 |
| exon | 216935 | 217095 |
| exon | 218569 | 218651 |
| CDS | 210156 | 210311 |
| CDS | 210670 | 210846 |
| CDS | 211192 | 211269 |
| CDS | 211367 | 211426 |
| CDS | 211623 | 211706 |
| CDS | 213454 | 213539 |
| CDS | 213913 | 214027 |
| CDS | 214205 | 214527 |
| CDS | 214924 | 215573 |
| CDS | 216935 | 217095 |
| CDS | 218569 | 218640 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.