Annotation of co-expression genes

PH01000732G0660's details annotation

1.Annotation

ICBR annotation: zinc finger, C3HC4 type domain containing protein, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000732
Strand: -

RegionStartEnd
gene462841467454
mRNA462841467454
exon462841463735
exon465080465256
exon465655466560
exon467172467454
CDS463589463735
CDS465080465256
CDS465655466560
CDS467172467330

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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