PH01000736G0030's details annotation
1.Annotation
ICBR annotation: ubiquitin family protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000736
Strand: +
| Region | Start | End |
| gene | 22454 | 29503 |
| mRNA | 22454 | 29503 |
| exon | 22454 | 22877 |
| exon | 24818 | 24921 |
| exon | 25033 | 25077 |
| exon | 25156 | 25296 |
| exon | 25525 | 25737 |
| exon | 26693 | 26764 |
| exon | 26847 | 26961 |
| exon | 27569 | 27964 |
| exon | 28709 | 29503 |
| CDS | 22508 | 22877 |
| CDS | 24818 | 24921 |
| CDS | 25033 | 25077 |
| CDS | 25156 | 25296 |
| CDS | 25525 | 25737 |
| CDS | 26693 | 26764 |
| CDS | 26847 | 26961 |
| CDS | 27569 | 27964 |
| CDS | 28709 | 29094 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000328 | amino_acid_transmembrane_transport amino acid transmembrane transporter activity, cell redox homeostasis, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.