PH01000740G0630's details annotation
1.Annotation
ICBR annotation: dehydrodolichyl diphosphate synthase, putative, expressed
Blast result AT2G17570 : 1.50E-73
Blast annotation: Undecaprenyl pyrophosphate synthetase family protein
2.Location
Scaffold: PH01000740
Strand: +
| Region | Start | End |
| gene | 355207 | 356382 |
| mRNA | 355207 | 356382 |
| exon | 355207 | 356382 |
| CDS | 355377 | 356246 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01255.18 | Prenyltransf | 41 | 273 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Terpenoid backbone biosynthesis | ditrans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.-] | ko00900 | K11778 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.