Annotation of co-expression genes

PH01000748G0300's details annotation

1.Annotation

ICBR annotation: mitotic checkpoint serine/threonine-protein kinase BUB1, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000748
Strand: -

RegionStartEnd
gene268863272227
mRNA268863272227
exon268863271179
exon271285271406
exon271678271767
exon272154272227
CDS271029271179
CDS271285271406
CDS271678271767
CDS272154272201

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.