Gene details

Annotation of co-expression genes

PH01000749G0620's details annotation

1.Annotation

ICBR annotation: SAM domain family protein, expressed

Blast result AT5G24650 : 1.80E-35
Blast annotation: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

2.Location

Scaffold: PH01000749
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000993	protein phosphatase type 2A complex, protein phosphatase type 2A regulator activity, mRNA_surveillance_pathway Ribosome_biogenesis_in_eukaryotes signal transduction,
coexpression network	CFinderM001571	protein phosphatase type 2A complex, Others Transcription_Regulator(from iTAK) mRNA_surveillance_pathway protein phosphatase type 2A regulator activity, RNA methyltransferase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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