PH01000750G0280's details annotation
1.Annotation
ICBR annotation: GRAM domain containing protein, expressed
Blast result AT1G28200 : 4.20E-61
Blast annotation: FH interacting protein 1
2.Location
Scaffold: PH01000750
Strand: +
| Region | Start | End |
| gene | 199746 | 201429 |
| mRNA | 199746 | 201429 |
| exon | 199746 | 200364 |
| exon | 200481 | 200570 |
| exon | 200678 | 200736 |
| exon | 201080 | 201248 |
| exon | 201347 | 201429 |
| CDS | 200193 | 200364 |
| CDS | 200481 | 200570 |
| CDS | 200678 | 200736 |
| CDS | 201080 | 201248 |
| CDS | 201347 | 201363 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000164 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02893.19 | GRAM | 117 | 235 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.