PH01000752G0420's details annotation
1.Annotation
ICBR annotation: proline-rich family protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000752
Strand: +
| Region | Start | End |
| gene | 325875 | 331528 |
| mRNA | 325875 | 331528 |
| exon | 325875 | 326291 |
| exon | 326453 | 326595 |
| exon | 326822 | 326914 |
| exon | 327104 | 327184 |
| exon | 327295 | 327445 |
| exon | 327761 | 327897 |
| exon | 329780 | 330040 |
| exon | 330771 | 330830 |
| exon | 331252 | 331528 |
| CDS | 326141 | 326291 |
| CDS | 326453 | 326595 |
| CDS | 326822 | 326914 |
| CDS | 327104 | 327184 |
| CDS | 327295 | 327445 |
| CDS | 327761 | 327897 |
| CDS | 329780 | 330040 |
| CDS | 330771 | 330830 |
| CDS | 331252 | 331308 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF16712.4 | SCAB_CC | 110 | 155 |
| PF16712.4 | SCAB_CC | 204 | 253 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.