PH01000753G0360's details annotation
1.Annotation
ICBR annotation: histidine acid phosphatase, putative, expressed
Blast result AT5G15070 : 4.00E-149
Blast annotation: Phosphoglycerate mutase-like family protein
2.Location
Scaffold: PH01000753
Strand: -
| Region | Start | End |
| gene | 207813 | 215270 |
| mRNA | 207813 | 215270 |
| exon | 207813 | 208102 |
| exon | 208440 | 208607 |
| exon | 208695 | 208752 |
| exon | 208842 | 209086 |
| exon | 209208 | 209279 |
| exon | 210123 | 210189 |
| exon | 210530 | 210574 |
| exon | 210688 | 210920 |
| exon | 213801 | 213926 |
| exon | 214463 | 214537 |
| exon | 214618 | 215270 |
| CDS | 207890 | 208102 |
| CDS | 208440 | 208607 |
| CDS | 208695 | 208752 |
| CDS | 208842 | 209086 |
| CDS | 209208 | 209279 |
| CDS | 210123 | 210189 |
| CDS | 210530 | 210574 |
| CDS | 210688 | 210920 |
| CDS | 213801 | 213926 |
| CDS | 214463 | 214537 |
| CDS | 214618 | 214680 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00328.21 | His_Phos_2 | 1 | 386 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003993 | acid phosphatase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.