PH01000753G0380's details annotation
1.Annotation
ICBR annotation: histidine acid phosphatase, putative, expressed
Blast result AT5G15070 : 0.00E+00
Blast annotation: Phosphoglycerate mutase-like family protein
2.Location
Scaffold: PH01000753
Strand: -
| Region | Start | End |
| gene | 227334 | 242605 |
| mRNA | 227334 | 242605 |
| exon | 227334 | 227945 |
| exon | 228185 | 228343 |
| exon | 229632 | 229713 |
| exon | 229937 | 230007 |
| exon | 230088 | 230187 |
| exon | 230266 | 230472 |
| exon | 230568 | 230653 |
| exon | 231406 | 231480 |
| exon | 232381 | 232473 |
| exon | 232904 | 233008 |
| exon | 236661 | 236731 |
| exon | 237003 | 237156 |
| exon | 238196 | 238259 |
| exon | 240631 | 240749 |
| exon | 240839 | 240904 |
| exon | 241568 | 241627 |
| exon | 241910 | 242605 |
| CDS | 227880 | 227945 |
| CDS | 228185 | 228343 |
| CDS | 229632 | 229713 |
| CDS | 229937 | 230007 |
| CDS | 230088 | 230187 |
| CDS | 230266 | 230472 |
| CDS | 230568 | 230653 |
| CDS | 231406 | 231480 |
| CDS | 232381 | 232473 |
| CDS | 232904 | 233008 |
| CDS | 236661 | 236731 |
| CDS | 237003 | 237156 |
| CDS | 238196 | 238259 |
| CDS | 240631 | 240749 |
| CDS | 240839 | 240904 |
| CDS | 241568 | 241627 |
| CDS | 241910 | 241975 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | phe-miR172a | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00328.21 | His_Phos_2 | 379 | 527 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003993 | acid phosphatase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.