PH01000764G0590's details annotation
1.Annotation
ICBR annotation: pentatricopeptide repeat protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000764
Strand: -
| Region | Start | End |
| gene | 386883 | 387788 |
| mRNA | 386883 | 387788 |
| exon | 386883 | 387558 |
| exon | 387664 | 387788 |
| CDS | 387134 | 387558 |
| CDS | 387664 | 387739 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001075 | SET Transcription_Regulator(from iTAK) histone_lysine_methylation Linoleic_acid_metabolism Lysine_degradation Cysteine_and_methionine_metabolism lipoxygenase activity, histone_binding histone-lysine N-methyltransferase activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, oxidation-reduction process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.