PH01000767G0620's details annotation
1.Annotation
ICBR annotation: ML domain protein, putative, expressed
Blast result AT3G11780 : 5.90E-27
Blast annotation: MD-2-related lipid recognition domain-containing protein / ML domain-containing protein
2.Location
Scaffold: PH01000767
Strand: +
| Region | Start | End |
| gene | 422645 | 425746 |
| mRNA | 422645 | 425746 |
| exon | 422645 | 423384 |
| exon | 424646 | 424803 |
| exon | 424992 | 425746 |
| CDS | 423375 | 423384 |
| CDS | 424646 | 424803 |
| CDS | 424992 | 425099 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000236 | NAK (from iTAK) STAT Transcription_Regulator(from PlantTFDB) Glycine,_serine_and_threonine_metabolism magnesium_ion_transport TKL-Pl-5 (from iTAK) magnesium_ion_transmembrane_transporter_activity |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02221.14 | E1_DerP2_DerF2 | 9 | 82 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.