PH01000771G0610's details annotation
1.Annotation
ICBR annotation: ABC1 family domain containing protein, putative, expressed
Blast result AT1G11390 : 0.00E+00
Blast annotation: Protein kinase superfamily protein
2.Location
Scaffold: PH01000771
Strand: -
| Region | Start | End |
| gene | 450680 | 455839 |
| mRNA | 450680 | 455839 |
| exon | 450680 | 451128 |
| exon | 451589 | 451744 |
| exon | 452488 | 452757 |
| exon | 452983 | 454371 |
| exon | 454651 | 455839 |
| CDS | 451027 | 451128 |
| CDS | 451589 | 451744 |
| CDS | 452488 | 452757 |
| CDS | 452983 | 454371 |
| CDS | 454651 | 454656 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03109.15 | ABC1 | 296 | 414 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.