PH01000774G0330's details annotation
1.Annotation
ICBR annotation: alpha-glucan water dikinase, chloroplast precursor, putative, expressed
Blast result AT1G10760 : 4.00E-175
Blast annotation: Pyruvate phosphate dikinase, PEP/pyruvate binding domain
2.Location
Scaffold: PH01000774
Strand: -
| Region | Start | End |
| gene | 264707 | 270399 |
| mRNA | 264707 | 270399 |
| exon | 264707 | 265370 |
| exon | 265525 | 265631 |
| exon | 265708 | 265884 |
| exon | 266572 | 266655 |
| exon | 266774 | 266926 |
| exon | 267095 | 267154 |
| exon | 267383 | 267445 |
| exon | 269615 | 269800 |
| exon | 269881 | 269970 |
| exon | 270083 | 270399 |
| CDS | 265100 | 265370 |
| CDS | 265525 | 265631 |
| CDS | 265708 | 265884 |
| CDS | 266572 | 266655 |
| CDS | 266774 | 266926 |
| CDS | 267095 | 267154 |
| CDS | 267383 | 267445 |
| CDS | 269615 | 269800 |
| CDS | 269881 | 269970 |
| CDS | 270083 | 270199 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Carbohydrate-Binding_Modules | CBM45 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.