PH01000776G0120's details annotation
1.Annotation
ICBR annotation: WW domain containing protein, expressed
Blast result AT3G13225 : 5.70E-23
Blast annotation: WW domain-containing protein
2.Location
Scaffold: PH01000776
Strand: -
| Region | Start | End |
| gene | 103143 | 111256 |
| mRNA | 103143 | 111256 |
| exon | 103143 | 103398 |
| exon | 103485 | 103580 |
| exon | 104041 | 104120 |
| exon | 104215 | 105407 |
| exon | 105512 | 106014 |
| exon | 106746 | 106761 |
| exon | 106847 | 107166 |
| exon | 107372 | 107455 |
| exon | 107834 | 107955 |
| exon | 108443 | 108523 |
| exon | 109966 | 111256 |
| CDS | 103300 | 103398 |
| CDS | 103485 | 103580 |
| CDS | 104041 | 104120 |
| CDS | 104215 | 105407 |
| CDS | 105512 | 106014 |
| CDS | 106746 | 106761 |
| CDS | 106847 | 107166 |
| CDS | 107372 | 107455 |
| CDS | 107834 | 107955 |
| CDS | 108443 | 108523 |
| CDS | 109966 | 110020 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000725 | Proteasome ATP synthesis coupled proton transport, protein catabolic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00397.25 | WW | 259 | 289 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.