PH01000778G0480's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000778
Strand: -
| Region | Start | End |
| gene | 281806 | 286786 |
| mRNA | 281806 | 286786 |
| exon | 281806 | 282225 |
| exon | 283234 | 283392 |
| exon | 283932 | 284015 |
| exon | 284164 | 286786 |
| CDS | 282151 | 282225 |
| CDS | 283234 | 283392 |
| CDS | 283932 | 284015 |
| CDS | 284164 | 284928 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000097 | GT59 GlycosylTransferases mRNA_cleavage_factor_complex Other_types_of_O-glycan_biosynthesis |
| coexpression network | CFinderM000948 | protein dephosphorylation, Ubiquitin_mediated_proteolysis Plant_hormone_signal_transduction |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.