Gene details

Annotation of co-expression genes

PH01000791G0230's details annotation

1.Annotation

ICBR annotation: GRAM and C2 domains containing protein, putative, expressed

Blast result AT5G43010 : 0.00E+00
Blast annotation: regulatory particle triple-A ATPase 4A

2.Location

Scaffold: PH01000791
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001112	protein phosphatase type 2A complex, GDP-Man:Man1GlcNAc2-PP-Dol_alpha-1,3-mannosyltransferase_activity glycolipid_6-alpha-mannosyltransferase_activity C3H Transcription_Regulator(from PlantTFDB) protein phosphatase type 2A regulator activity, mRNA_surveillance_pathway Proteasome protein catabolic process,
coexpression network	CFinderM001421	protein catabolic process, Proteasome Glycine,_serine_and_threonine_metabolism protein phosphatase type 2A complex, cytoplasm, protein phosphatase type 2A regulator activity, Rab GDP-dissociation inhibitor activity, nucleoside-triphosphatase activity, hydrolase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Proteasome	26S proteasome regulatory subunit T4	ko03051	K03064

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0005515	protein binding
GO:0005524	ATP binding
GO:0005737	cytoplasm
GO:0016787	hydrolase activity
GO:0017111	nucleoside-triphosphatase activity
GO:0030163	protein catabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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