PH01000791G0450's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G25360 : 1.10E-33
Blast annotation: -
2.Location
Scaffold: PH01000791
Strand: -
| Region | Start | End |
| gene | 266565 | 269110 |
| mRNA | 266565 | 269110 |
| exon | 266565 | 267056 |
| exon | 267175 | 267315 |
| exon | 267469 | 267550 |
| exon | 267841 | 267931 |
| exon | 268509 | 269110 |
| CDS | 267003 | 267056 |
| CDS | 267175 | 267315 |
| CDS | 267469 | 267550 |
| CDS | 267841 | 267931 |
| CDS | 268509 | 268626 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13259.5 | DUF4050 | 5 | 67 |
| PF13259.5 | DUF4050 | 69 | 109 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.