PH01000796G0560's details annotation
1.Annotation
ICBR annotation: POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000796
Strand: +
| Region | Start | End |
| gene | 467689 | 470273 |
| mRNA | 467689 | 470273 |
| exon | 467689 | 470273 |
| CDS | 468966 | 469319 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001153 | translation, Ribosome structural constituent of ribosome, alpha-amylase activity, intracellular, large ribosomal subunit, rRNA binding, cation binding, |
| coexpression network | CFinderM001509 | Fatty_acid_metabolism alpha-Linolenic_acid_metabolism Ribosome nuclear pore, fatty acid metabolic process, translation, DNA integration, 3-hydroxyacyl-CoA_dehydrogenase_activity |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.