PH01000811G0390's details annotation
1.Annotation
ICBR annotation: GDSL-like lipase/acylhydrolase, putative, expressed
Blast result AT1G56670 : 3.70E-45
Blast annotation: GDSL-like Lipase/Acylhydrolase superfamily protein
2.Location
Scaffold: PH01000811
Strand: -
| Region | Start | End |
| gene | 252659 | 254348 |
| mRNA | 252659 | 254348 |
| exon | 252659 | 253136 |
| exon | 253247 | 253517 |
| exon | 253662 | 253825 |
| exon | 253998 | 254084 |
| exon | 254204 | 254348 |
| CDS | 252892 | 253136 |
| CDS | 253247 | 253517 |
| CDS | 253662 | 253825 |
| CDS | 253998 | 254084 |
| CDS | 254204 | 254219 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00657.21 | Lipase_GDSL | 42 | 242 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006629 | lipid metabolic process |
| GO:0016787 | hydrolase activity |
| GO:0016788 | hydrolase activity, acting on ester bonds |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.