PH01000820G0560's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000820
Strand: +
| Region | Start | End |
| gene | 430913 | 433737 |
| mRNA | 430913 | 433737 |
| exon | 430913 | 431330 |
| exon | 431657 | 431691 |
| exon | 432108 | 432152 |
| exon | 433159 | 433737 |
| CDS | 431033 | 431330 |
| CDS | 431657 | 431691 |
| CDS | 432108 | 432152 |
| CDS | 433159 | 433341 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000312 | proton-transporting V-type ATPase, V0 domain, phosphatidylinositol phosphorylation, ATP hydrolysis coupled proton transport, transcription, DNA-dependent, DNA-directed RNA polymerase activity, hydrogen ion transmembrane transporter activity, |
| coexpression network | CFinderM000665 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.