PH01000832G0640's details annotation
1.Annotation
ICBR annotation: plastocyanin, chloroplast precursor, putative, expressed
Blast result AT1G76100 : 1.10E-38
Blast annotation: plastocyanin 1
2.Location
Scaffold: PH01000832
Strand: -
| Region | Start | End |
| gene | 397176 | 398542 |
| mRNA | 397176 | 398542 |
| exon | 397176 | 398542 |
| CDS | 397693 | 398010 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00127.19 | Copper-bind | 11 | 105 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Photosynthesis | plastocyanin | ko00195 | K02638 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005507 | copper ion binding |
| GO:0009055 | electron carrier activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.