PH01000836G0540's details annotation
1.Annotation
ICBR annotation: ATEXO70G1, putative, expressed
Blast result AT4G31540 : 1.00E-160
Blast annotation: exocyst subunit exo70 family protein G1
2.Location
Scaffold: PH01000836
Strand: +
| Region | Start | End |
| gene | 357266 | 360475 |
| mRNA | 357266 | 360475 |
| exon | 357266 | 358588 |
| exon | 358831 | 360475 |
| CDS | 358454 | 358588 |
| CDS | 358831 | 360444 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03081.14 | Exo70 | 191 | 545 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000145 | exocyst |
| GO:0006887 | exocytosis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.