PH01000846G0010's details annotation
1.Annotation
ICBR annotation: protein kinase domain containing protein, expressed
Blast result AT2G19190 : 2.70E-53
Blast annotation: FLG22-induced receptor-like kinase 1
2.Location
Scaffold: PH01000846
Strand: -
| Region | Start | End |
| gene | 716 | 5339 |
| mRNA | 716 | 5339 |
| exon | 716 | 1067 |
| exon | 2094 | 2145 |
| exon | 2489 | 3129 |
| exon | 3343 | 3411 |
| exon | 4790 | 5339 |
| CDS | 727 | 1067 |
| CDS | 2094 | 2145 |
| CDS | 2489 | 3129 |
| CDS | 3343 | 3411 |
| CDS | 4790 | 5063 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000047 | isomerase activity, Brassinosteroid_biosynthesis carbohydrate metabolic process, carbohydrate binding, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06246.11 | Isy1 | 2 | 60 |
| PF07714.16 | Pkinase_Tyr | 97 | 276 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.