Gene details

Annotation of co-expression genes

PH01000855G0300's details annotation

1.Annotation

ICBR annotation: HEAT repeat family protein, putative, expressed

Blast result AT5G01400 : 8.00E-143
Blast annotation: HEAT repeat-containing protein

2.Location

Scaffold: PH01000855
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000938	proton-transporting two-sector ATPase complex, proton-transporting domain, proton-transporting V-type ATPase, V0 domain, binding, mRNA_surveillance_pathway hydrogen ion transmembrane transporter activity, ATP hydrolysis coupled proton transport, TORC1_complex Phagosome Oxidative_phosphorylation phosphotransferase activity, alcohol group as acceptor, TOR_signaling rRNA_catabolic_process
coexpression network	CFinderM001390	dTMP biosynthetic process, dihydrofolate reductase activity, thymidylate synthase activity, mRNA_surveillance_pathway
coexpression network	CFinderM001711	intracellular protein transport, binding,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF11935.7	DUF3453	93	297

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
mRNA surveillance pathway	symplekin	ko03015	K06100

10.Gene Ontology

GO Accession	GO Annotation
GO:0005488	binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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