PH01000858G0530's details annotation
1.Annotation
ICBR annotation: nucleoside-triphosphatase, putative, expressed
Blast result AT3G04080 : 3.30E-83
Blast annotation: apyrase 1
2.Location
Scaffold: PH01000858
Strand: +
| Region | Start | End |
| gene | 354873 | 359249 |
| mRNA | 354873 | 359249 |
| exon | 354873 | 355180 |
| exon | 355749 | 355877 |
| exon | 355960 | 356016 |
| exon | 356151 | 356243 |
| exon | 356323 | 356528 |
| exon | 356772 | 356863 |
| exon | 356995 | 357393 |
| exon | 357584 | 357621 |
| exon | 358033 | 359249 |
| CDS | 355043 | 355180 |
| CDS | 355749 | 355877 |
| CDS | 355960 | 356016 |
| CDS | 356151 | 356243 |
| CDS | 356323 | 356528 |
| CDS | 356772 | 356863 |
| CDS | 356995 | 357393 |
| CDS | 357584 | 357621 |
| CDS | 358033 | 359031 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01150.16 | GDA1_CD39 | 44 | 385 |
| PF04859.11 | DUF641 | 569 | 636 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016787 | hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.