PH01000875G0210's details annotation
1.Annotation
ICBR annotation: ECT protein, putative, expressed
Blast result AT1G55500 : 2.20E-71
Blast annotation: evolutionarily conserved C-terminal region 4
2.Location
Scaffold: PH01000875
Strand: +
| Region | Start | End |
| gene | 135841 | 139787 |
| mRNA | 135841 | 139787 |
| exon | 135841 | 136546 |
| exon | 136687 | 137562 |
| exon | 138049 | 138261 |
| exon | 138607 | 138813 |
| exon | 139357 | 139787 |
| CDS | 136208 | 136546 |
| CDS | 136687 | 137562 |
| CDS | 138049 | 138261 |
| CDS | 138607 | 138813 |
| CDS | 139357 | 139410 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04146.14 | YTH | 349 | 490 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.