PH01000876G0080's details annotation
1.Annotation
ICBR annotation: Lg106, putative
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000876
Strand: -
| Region | Start | End |
| gene | 55374 | 58149 |
| mRNA | 55374 | 58149 |
| exon | 55374 | 55459 |
| exon | 55590 | 55653 |
| exon | 55928 | 55956 |
| exon | 56016 | 56072 |
| exon | 56170 | 56217 |
| exon | 56491 | 56547 |
| exon | 57884 | 58149 |
| CDS | 55400 | 55459 |
| CDS | 55590 | 55653 |
| CDS | 55928 | 55956 |
| CDS | 56016 | 56072 |
| CDS | 56170 | 56217 |
| CDS | 56491 | 56547 |
| CDS | 57884 | 57931 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000118 | |
| coexpression network | CFinderM000155 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04667.16 | Endosulfine | 11 | 72 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.