PH01000885G0080's details annotation
1.Annotation
ICBR annotation: zinc finger family protein, putative, expressed
Blast result AT4G15080 : 3.00E-142
Blast annotation: DHHC-type zinc finger family protein
2.Location
Scaffold: PH01000885
Strand: -
| Region | Start | End |
| gene | 59839 | 66938 |
| mRNA | 59839 | 66938 |
| exon | 59839 | 61338 |
| exon | 61489 | 61677 |
| exon | 61763 | 61843 |
| exon | 62184 | 62309 |
| exon | 62576 | 62644 |
| exon | 62737 | 63138 |
| exon | 63243 | 63356 |
| exon | 63973 | 64091 |
| exon | 65548 | 66938 |
| CDS | 60337 | 61338 |
| CDS | 61489 | 61677 |
| CDS | 61763 | 61843 |
| CDS | 62184 | 62309 |
| CDS | 62576 | 62644 |
| CDS | 62737 | 63138 |
| CDS | 63243 | 63356 |
| CDS | 63973 | 64091 |
| CDS | 65548 | 65632 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008270 | zinc ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.