PH01000893G0520's details annotation
1.Annotation
ICBR annotation: Zinc finger, ZZ type domain containing protein, expressed
Blast result AT3G24800 : 1.30E-19
Blast annotation: proteolysis 1
2.Location
Scaffold: PH01000893
Strand: +
| Region | Start | End |
| gene | 298828 | 307261 |
| mRNA | 298828 | 307261 |
| exon | 298828 | 300148 |
| exon | 300932 | 300960 |
| exon | 302789 | 302860 |
| exon | 302941 | 303117 |
| exon | 303241 | 303405 |
| exon | 304401 | 304513 |
| exon | 306163 | 307261 |
| CDS | 300018 | 300148 |
| CDS | 300932 | 300960 |
| CDS | 302789 | 302860 |
| CDS | 302941 | 303117 |
| CDS | 303241 | 303405 |
| CDS | 304401 | 304513 |
| CDS | 306163 | 306714 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.