PH01000901G0580's details annotation
1.Annotation
ICBR annotation: MLA7, putative
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000901
Strand: -
| Region | Start | End |
| gene | 371501 | 378870 |
| mRNA | 371501 | 378870 |
| exon | 371501 | 372072 |
| exon | 372142 | 373622 |
| exon | 375369 | 375675 |
| exon | 375964 | 376056 |
| exon | 376114 | 376445 |
| exon | 376929 | 376941 |
| exon | 377266 | 377426 |
| exon | 377612 | 378870 |
| CDS | 371746 | 372072 |
| CDS | 372142 | 373622 |
| CDS | 375369 | 375675 |
| CDS | 375964 | 376056 |
| CDS | 376114 | 376445 |
| CDS | 376929 | 376941 |
| CDS | 377266 | 377426 |
| CDS | 377612 | 377780 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000415 | SOS_response DNA metabolic process, |
| coexpression network | CFinderM000570 | ADP_binding defense response, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.