PH01000904G0010's details annotation
1.Annotation
ICBR annotation: monocopper oxidase, putative
Blast result AT4G12420 : 0.00E+00
Blast annotation: Cupredoxin superfamily protein
2.Location
Scaffold: PH01000904
Strand: +
| Region | Start | End |
| gene | 9751 | 14677 |
| mRNA | 9751 | 14677 |
| exon | 9751 | 10230 |
| exon | 10499 | 10775 |
| exon | 10901 | 11039 |
| exon | 12064 | 12430 |
| exon | 12527 | 12892 |
| exon | 12974 | 13052 |
| exon | 14600 | 14677 |
| CDS | 10052 | 10230 |
| CDS | 10499 | 10775 |
| CDS | 10901 | 11039 |
| CDS | 12064 | 12430 |
| CDS | 12527 | 12892 |
| CDS | 12974 | 13052 |
| CDS | 14600 | 14629 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07732.14 | Cu-oxidase_3 | 33 | 146 |
| PF00394.21 | Cu-oxidase | 159 | 312 |
| PF07731.13 | Cu-oxidase_2 | 426 | 533 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.