PH01000906G0590's details annotation
1.Annotation
ICBR annotation: glycine-rich protein, putative, expressed
Blast result AT5G11700 : 1.90E-54
Blast annotation: -
2.Location
Scaffold: PH01000906
Strand: +
| Region | Start | End |
| gene | 409719 | 414241 |
| mRNA | 409719 | 414241 |
| exon | 409719 | 410503 |
| exon | 410752 | 410990 |
| exon | 411815 | 411930 |
| exon | 412758 | 412966 |
| exon | 413523 | 414241 |
| CDS | 410156 | 410503 |
| CDS | 410752 | 410990 |
| CDS | 411815 | 411930 |
| CDS | 412758 | 412966 |
| CDS | 413523 | 413990 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000550 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.