PH01000915G0060's details annotation
1.Annotation
ICBR annotation: uvrB/uvrC motif family protein, expressed
Blast result AT5G25070 : 1.10E-85
Blast annotation: -
2.Location
Scaffold: PH01000915
Strand: +
| Region | Start | End |
| gene | 26884 | 31748 |
| mRNA | 26884 | 31748 |
| exon | 26884 | 28824 |
| exon | 29975 | 30661 |
| exon | 30800 | 31286 |
| exon | 31453 | 31748 |
| CDS | 27736 | 28824 |
| CDS | 29975 | 30661 |
| CDS | 30800 | 31286 |
| CDS | 31453 | 31571 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02151.18 | UVR | 285 | 318 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.