PH01000915G0770's details annotation
1.Annotation
ICBR annotation: leucine rich repeat containing protein, expressed
Blast result AT4G35470 : 3.00E-158
Blast annotation: plant intracellular ras group-related LRR 4
2.Location
Scaffold: PH01000915
Strand: +
| Region | Start | End |
| gene | 467400 | 471103 |
| mRNA | 467400 | 471103 |
| exon | 467400 | 469241 |
| exon | 469722 | 470632 |
| exon | 470731 | 471103 |
| CDS | 468779 | 469241 |
| CDS | 469722 | 470632 |
| CDS | 470731 | 470874 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13855.5 | LRR_8 | 224 | 282 |
| PF13855.5 | LRR_8 | 386 | 445 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.