PH01000920G0290's details annotation
1.Annotation
ICBR annotation: IF, putative, expressed
Blast result AT5G26770 : 2.00E-42
Blast annotation: -
2.Location
Scaffold: PH01000920
Strand: +
| Region | Start | End |
| gene | 233773 | 238691 |
| mRNA | 233773 | 238691 |
| exon | 233773 | 234281 |
| exon | 234927 | 235385 |
| exon | 235482 | 235523 |
| exon | 236558 | 236717 |
| exon | 237398 | 237442 |
| exon | 237526 | 237590 |
| exon | 238387 | 238691 |
| CDS | 234084 | 234281 |
| CDS | 234927 | 235385 |
| CDS | 235482 | 235523 |
| CDS | 236558 | 236717 |
| CDS | 237398 | 237442 |
| CDS | 237526 | 237590 |
| CDS | 238387 | 238608 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.