PH01000926G0070's details annotation
1.Annotation
ICBR annotation: growth regulator related protein, putative, expressed
Blast result AT5G35570 : 5.00E-104
Blast annotation: O-fucosyltransferase family protein
2.Location
Scaffold: PH01000926
Strand: -
| Region | Start | End |
| gene | 49080 | 53121 |
| mRNA | 49080 | 53121 |
| exon | 49080 | 50024 |
| exon | 50172 | 50648 |
| exon | 51795 | 51883 |
| exon | 51970 | 52040 |
| exon | 52130 | 52199 |
| exon | 52362 | 52428 |
| exon | 52800 | 53121 |
| CDS | 49823 | 50024 |
| CDS | 50172 | 50648 |
| CDS | 51795 | 51883 |
| CDS | 51970 | 52040 |
| CDS | 52130 | 52199 |
| CDS | 52362 | 52428 |
| CDS | 52800 | 52858 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10250.8 | O-FucT | 119 | 267 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.