PH01000928G0530's details annotation
1.Annotation
ICBR annotation: acetyltransferase, GNAT family, putative, expressed
Blast result AT1G18335 : 3.80E-28
Blast annotation: Acyl-CoA N-acyltransferases (NAT) superfamily protein
2.Location
Scaffold: PH01000928
Strand: +
| Region | Start | End |
| gene | 422579 | 425070 |
| mRNA | 422579 | 425070 |
| exon | 422579 | 423569 |
| exon | 424093 | 424161 |
| exon | 424471 | 425070 |
| CDS | 423246 | 423569 |
| CDS | 424093 | 424161 |
| CDS | 424471 | 424482 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000254 | GNAT Transcription_Regulator(from iTAK) GT47 GlycosylTransferases HSF Transcription_Regulator(from PlantTFDB) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | GNAT |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00583.24 | Acetyltransf_1 | 43 | 103 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008080 | N-acetyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.