PH01000935G0040's details annotation
1.Annotation
ICBR annotation: GDSL-like lipase/acylhydrolase, putative, expressed
Blast result AT3G04290 : 2.00E-137
Blast annotation: Li-tolerant lipase 1
2.Location
Scaffold: PH01000935
Strand: -
| Region | Start | End |
| gene | 23770 | 26079 |
| mRNA | 23770 | 26079 |
| exon | 23770 | 24681 |
| exon | 24774 | 25026 |
| exon | 25144 | 25302 |
| exon | 25514 | 25641 |
| exon | 25755 | 26079 |
| CDS | 24443 | 24681 |
| CDS | 24774 | 25026 |
| CDS | 25144 | 25302 |
| CDS | 25514 | 25641 |
| CDS | 25755 | 25959 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00657.21 | Lipase_GDSL | 34 | 345 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006629 | lipid metabolic process |
| GO:0016787 | hydrolase activity |
| GO:0016788 | hydrolase activity, acting on ester bonds |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.