PH01000941G0160's details annotation
1.Annotation
ICBR annotation: TMV-MP30 binding protein 2C, putative, expressed
Blast result AT5G08120 : 4.00E-23
Blast annotation: movement protein binding protein 2C
2.Location
Scaffold: PH01000941
Strand: +
| Region | Start | End |
| gene | 81995 | 84823 |
| mRNA | 81995 | 84823 |
| exon | 81995 | 82275 |
| exon | 82371 | 82419 |
| exon | 82722 | 83003 |
| exon | 83919 | 84140 |
| exon | 84320 | 84823 |
| CDS | 82199 | 82275 |
| CDS | 82371 | 82419 |
| CDS | 82722 | 83003 |
| CDS | 83919 | 84140 |
| CDS | 84320 | 84469 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.