PH01000942G0480's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000942
Strand: -
| Region | Start | End |
| gene | 341598 | 351643 |
| mRNA | 341598 | 351643 |
| exon | 341598 | 342878 |
| exon | 343198 | 343249 |
| exon | 343547 | 343658 |
| exon | 344331 | 344432 |
| exon | 344500 | 344572 |
| exon | 345060 | 345139 |
| exon | 345216 | 345407 |
| exon | 345568 | 345717 |
| exon | 346113 | 346184 |
| exon | 346694 | 346696 |
| exon | 347072 | 347143 |
| exon | 347274 | 348242 |
| exon | 349480 | 350087 |
| exon | 351164 | 351643 |
| CDS | 342617 | 342878 |
| CDS | 343198 | 343249 |
| CDS | 343547 | 343658 |
| CDS | 344331 | 344432 |
| CDS | 344500 | 344572 |
| CDS | 345060 | 345139 |
| CDS | 345216 | 345407 |
| CDS | 345568 | 345717 |
| CDS | 346113 | 346184 |
| CDS | 346694 | 346696 |
| CDS | 347072 | 347143 |
| CDS | 347274 | 348242 |
| CDS | 349480 | 350087 |
| CDS | 351164 | 351488 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
| GO:0006457 | protein folding |
| GO:0006950 | response to stress |
| GO:0051082 | unfolded protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.