Gene details

Annotation of co-expression genes

PH01000950G0430's details annotation

1.Annotation

ICBR annotation: formate--tetrahydrofolate ligase, putative, expressed

Blast result AT1G50480 : 0.00E+00
Blast annotation: 10-formyltetrahydrofolate synthetase

2.Location

Scaffold: PH01000950
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001557	RLK-Pelle_LysM (from iTAK) formate-tetrahydrofolate ligase activity, phosphotransferase activity, for other substituted phosphate groups, folic acid-containing compound biosynthetic process, phospholipid biosynthetic process, One_carbon_pool_by_folate Various_types_of_N-glycan_biosynthesis Carbon_fixation_pathways_in_prokaryotes N-Glycan_biosynthesis dolichyl-diphosphooligosaccharide-protein glycotransferase activity, NAC Transcription_Regulator(from PlantTFDB)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Carbon fixation pathways in prokaryotes	formate--tetrahydrofolate ligase [EC:6.3.4.3]	ko00720	K01938
One carbon pool by folate	formate--tetrahydrofolate ligase [EC:6.3.4.3]	ko00670	K01938

10.Gene Ontology

GO Accession	GO Annotation
GO:0004329	formate-tetrahydrofolate ligase activity
GO:0005524	ATP binding
GO:0009396	folic acid-containing compound biosynthetic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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