PH01000952G0490's details annotation
1.Annotation
ICBR annotation: SEC14 cytosolic factor family protein, putative, expressed
Blast result AT5G63060 : 6.50E-73
Blast annotation: Sec14p-like phosphatidylinositol transfer family protein
2.Location
Scaffold: PH01000952
Strand: -
| Region | Start | End |
| gene | 364614 | 368954 |
| mRNA | 364614 | 368954 |
| exon | 364614 | 365129 |
| exon | 365872 | 365994 |
| exon | 366463 | 366615 |
| exon | 366940 | 367086 |
| exon | 367759 | 367986 |
| exon | 368158 | 368954 |
| CDS | 365058 | 365129 |
| CDS | 365872 | 365994 |
| CDS | 366463 | 366615 |
| CDS | 366940 | 367086 |
| CDS | 367759 | 367986 |
| CDS | 368158 | 368586 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001237 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00650.19 | CRAL_TRIO | 238 | 356 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.