PH01000960G0320's details annotation
1.Annotation
ICBR annotation: uncharacterized oxidoreductase, putative, expressed
Blast result AT4G09670 : 3.30E-64
Blast annotation: Oxidoreductase family protein
2.Location
Scaffold: PH01000960
Strand: -
| Region | Start | End |
| gene | 210166 | 214607 |
| mRNA | 210166 | 214607 |
| exon | 210166 | 210967 |
| exon | 211581 | 211640 |
| exon | 214111 | 214607 |
| CDS | 210347 | 210967 |
| CDS | 211581 | 211640 |
| CDS | 214111 | 214173 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008152 | metabolic process |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.