Gene details

Annotation of co-expression genes

PH01000961G0160's details annotation

1.Annotation

ICBR annotation: DNA repair protein RAD51 homolog 4, putative, expressed

Blast result AT1G07745 : 2.90E-38
Blast annotation: homolog of RAD51 D

2.Location

Scaffold: PH01000961
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000340	PEK_PEK (from iTAK) Steroid_biosynthesis Homologous_recombination DNA metabolic process, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF08423.10	Rad51	70	205

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Homologous recombination	RAD51-like protein 3	ko03440	K10871

10.Gene Ontology

GO Accession	GO Annotation
GO:0003677	DNA binding
GO:0005524	ATP binding
GO:0006259	DNA metabolic process
GO:0008094	DNA-dependent ATPase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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